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International Conference on Mathematical Biology and

Annual Meeting of The Society for Mathematical Biology,

July 27-30, 2009

University of British Columbia, Vancouver

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Program

MSB3b
Laurent Kreplak
Structural nanomechanics lab, Department of Physics and Atmospheric Science, Dalhousie University
Title Nanomechanics of self-assembled protein filaments
Abstract Over the past twenty years, several experimental tools have been developed to measure the mechanical properties of single biopolymers such as DNA. Atomic force microscopy (AFM) or optical tweezers provide direct measurements of the force versus extension curve. So far all the single biopolymer pulling experiments can be described using either the worm like chain (WLC) model or various two-states polymer models.

I will present mechanical studies of a more complex class of biopolymers, i.e. self-assembled protein filaments. This group encompasses proteins such as myosin, collagen, fibrinogen and intermediate filament (IF) proteins. All these proteins have in common the ability to self-assemble into rope-like or rod-like structures 10 to 100 nm in diameter. Another common characteristic is the shape of the building-blocks which are 50 to 500 nm long coiled coils with diameters around 2-3 nm. The mechanical properties of these systems are much more complex than the ones of single biopolymers and necessitate different experimental approaches. For example they can exhibit, high extensibility (above 100% extension), strain stiffening effects, and anisotropic elastic properties. I will present experimental evidence of these behaviors and our first attempts to interpret our data in terms of molecular deformations.
LocationWoodward 3